{
  "modal_box.json": {
    "origin": "E:\\Erdos Problems\\key_results\\RAFs\\Compatibility_Competing_Biochemical_Modules_arxiv\\data\\modal_box.json",
    "source_sha256": "09ff83c30f24cd6b86fea53cad2103dfd7f58cd2300facdcf7a62f962c88c3f8",
    "adaptation": "Unmodified rational certificate input, independently rechecked; not trusted as a numerical result."
  },
  "tube_nominal.json": {
    "origin": "E:\\Erdos Problems\\key_results\\RAFs\\Compatibility_Competing_Biochemical_Modules_arxiv\\data\\tube_nominal.json",
    "source_sha256": "ce9975c63293f0dc1c81e5dc8f9d9d9655e5c6e925d78eac49897200885756c1",
    "adaptation": "Unmodified rational certificate input, independently rechecked; not trusted as a numerical result."
  },
  "tube_Q120.json": {
    "origin": "E:\\Erdos Problems\\key_results\\RAFs\\Compatibility_Competing_Biochemical_Modules_arxiv\\data\\tube_Q120.json",
    "source_sha256": "995f9be15bae7f03c2dfaeaf1e2d0e0f066d64b4f62ce96e25cc5be0e7a2ef9c",
    "adaptation": "Unmodified rational certificate input, independently rechecked; not trusted as a numerical result."
  },
  "tube_Q60.json": {
    "origin": "E:\\Erdos Problems\\key_results\\RAFs\\Compatibility_Competing_Biochemical_Modules_arxiv\\data\\tube_Q60.json",
    "source_sha256": "49b789d73b0769bb314266200a354da373fd36525b5a1ca9ff76e4364298332c",
    "adaptation": "Unmodified rational certificate input, independently rechecked; not trusted as a numerical result."
  },
  "tube_kernel.py": {
    "origin": "E:\\Erdos Problems\\key_results\\RAFs\\Compatibility_Competing_Biochemical_Modules_arxiv\\scripts\\depleted_tube.py",
    "source_sha256": "b3f98d4810d1180fcb454361911885c5f9a9ea943f96f4250b400cfb4837f568",
    "adaptation": "Retain exact field, Jacobian, step inequalities and verifier. Remove numerical builder/CLI; load certificate files beside module. Fresh driver validates input metadata and saves results separately."
  },
  "branches.py": {
    "origin": "Companion example 49, example.py",
    "source_sha256": "8565046631207bdd34059de85a1294015bbd99bcfe413c3159dc4f3ad22467e3",
    "adaptation": "Retain branch response/design and full retained-state kinetic classes plus literal nominal factory; remove previous driver, audit and editable constants. New dynamics add matched repair scale and supply laws."
  }
}